Research progress on nitrogen-fixing microorganisms in extreme environments

doi:10.14088/j.cnki.issn0439-8114.2023.03.033

Abstract

Abstract: Biological nitrogen fixation is an important part of the entire planet's nitrogen cycle, and is the main source of initial productivity in the extreme environment. It has a great impact on the global ecosystem and has been a hot spot of international concern for a long time. This article briefly reviewed recent research progress on nitrogen-fixing microorganisms and their effects in extreme environments such as oceans（including deep seas）, north and south poles, mountains, plateaus, glaciers and so on, and some ideas and prospects for future research directions were put forward.

Key words: extreme environment, nitrogen-fixing microorganism, research progress

CLC Number:

Q938

YUAN Jia-lin, WANG Yu-jing, WANG Long, LIU Jie. Research progress on nitrogen-fixing microorganisms in extreme environments[J]. HUBEI AGRICULTURAL SCIENCES, 2023, 62(3): 213-217.

References

[1] 王晓姗,刘杰,于建生. 海洋氮循环细菌研究进展[J]. 科学技术与工程,2009,9(17):5057-5064.
[2] ZEHR J P.Nitrogen fixation by marine cyanobacteria[J]. Trends in microbiology,2011,19(4):162-173.
[3] TURK-KUBO K A, ACHILLES K M, SERROS T R C, et al. Nitrogenase (nifH) gene expression in diazotrophic cyanobacteria in the Tropical North Atlantic in response to nutrient amendments[J]. Frontiers in microbiology,2012,3:386.
[4] 洪义国. 硝酸盐氮氧稳定同位素分馏过程记录的海洋氮循环研究进展[J]. 地球科学进展,2013,28(7):751-764.
[5] FARNELID H, BENTZON-TILIA M, ANDERSSON A F, et al.Active nitrogen-fixing heterotrophic bacteria at and below the chemocline of the central Baltic Sea[J].The ISME Journal,2013,7(7):1413-1423.
[6] WU Y, CAO Y, WANG C, et al.Microbial community structure and nitrogenase gene diversity of sediment from a deep-sea hydrothermal vent field on the Southwest Indian Ridge[J]. Acta Oceanologica Sinica,2014,33(10):94-104.
[7] 刘杰, 王延鹏, 孙景, 等. 青岛海域固氮细菌的系统发育多样性研究[J]. 科学技术与工程,2015,15(14):6-10.
[8] 张丽红, 刘艳芳, 胡青平. 中国南海一株固氮类芽孢杆菌的筛选和分离鉴定[J]. 海洋科学,2015,39(3):100-105.
[9] THAJUDEEN J, YOUSUF J, VEETIL V P, et al.Nitrogen fixing bacterial diversity in a tropical estuarine sediments[J]. World journal of microbiology and biotechnology,2017,33(2):41.
[10] CHEUNG S, SUZUKI K, SAITO H, et al.Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan[J]. PLoS One,2017,12(10):e0186875.
[11] 王聪, 凌娟, 张燕英, 等. 海洋固氮菌和解磷菌的分离鉴定及发酵条件优化[J]. 微生物学报,2018,58(5):817-829.
[12] LI Y Y, CHEN X H, XIE Z X, et al.Bacterial diversity and nitrogen utilization strategies in the upper layer of the northwestern Pacific Ocean[J]. Frontiers in microbiology,2018,9:797.
[13] FARNELID H, TURK-KUBO K, PLOUG H, et al.Diverse diazotrophs are present on sinking particles in the North Pacific Subtropical Gyre[J]. The ISME Journal,2019,13(1):170-182.
[14] 陈家欣,谈慧娟,林楠,等. 南海东海岛近海固氮细菌多样性及对菜心的促生作用[J]. 微生物学报,2020,60(2):359-370.
[15] KAPILI B J, BARNETT S E, BUCKLEY D H, et al.Evidence for phylogenetically and catabolically diverse active diazotrophs in deep-sea sediment[J]. The ISME Journal,2020,14(4):971-983.
[16] WANG Y,LIAO S,GAI Y,et al.Metagenomic analysis reveals microbial community structure and metabolic potential for nitrogen acquisition in the oligotrophic surface water of the Indian Ocean[J]. Frontiers in microbiology,2021,12: 229.
[17] HALLE T G.The mesozoic flora of Graham Land[A]. Wissenschaftliche Ergebnisse der Schwedischen Sǖdpolar-Expedition[M]. Paris:Hachette livre,1913.
[18] 曾胤新, 陈波, 邹扬, 等. 极地微生物——新天然药物的潜在来源[J].微生物学报,2008,48(5):695-700.
[19] ALLNUTT F C T, PARKER B C, SEABURG K G, et al. In situ, nitrogen (C2H2) fixation in lakes of southern Victoria Land, Antarctica[J]. Aquatic ecology,1981,15(3):99-109.
[20] VINCENT W F.Microbial ecosystems of Antarctica[M]. Cambridge: Cambridge university press,1988.173.
[21] 肖昌松, 刘大力, 周培瑾. 南极长城站地区土壤微生物生态作用的初步探讨[J]. 生物多样性,1995,3(3):134-138.
[22] BURKINS M B, VIRGINIA R A, CHAMBERLAIN C P, et al.Origin and distribution of soil organic matter in Taylor Valley, Antarctica[J]. Ecology,2000,81(9):2377-2391.
[23] NIEDERBERGER T D, SOHM J A, TIRINDELLI J, et al.Diverse and highly active diazotrophic assemblages inhabit ephemerally wetted soils of the Antarctic Dry Valleys[J]. Fems microbiology Ecology,2012,82(2):376-390.
[24] GESHEVA V, NEGOITA T.Psychrotrophic microorganism communities in soils of Haswell Island, Antarctica, and their biosynthetic potential[J]. Polar biology,2012,35(2):291-297.
[25] 刘杰,张丹丹,董龙龙,等. 南极菲尔德斯半岛土壤氮循环微生物类群数量与功能活性的初步研究[J].极地研究,2017, 29(1):82-89.
[26] COYNE K J, PARKER A E, LEE C K, et al.The distribution and relative ecological roles of autotrophic and heterotrophic diazotrophs in the McMurdo Dry Valleys, Antarctica[J]. FEMS microbiology ecology,2020,96(3):973-976.
[27] DÍEZ B, BERGMAN B, PEDRÓS-ALIÓ C, et al. High cyanobacterial nifH gene diversity in Arctic seawater and sea ice brine[J]. Environmental microbiology reports,2012,4(3):360-366.
[28] 刘杰, 李胜男, 郭昱东, 等. 北极斯瓦尔巴群岛冰川流域可培养细菌的系统发育多样性及固氮菌初步研究[J]. 极地研究, 2017,29(4):496-505.
[29] GRADOVILLE M R, CRUMP B C, LETELIER R M, et al.Microbiome of Trichodesmium colonies from the North Pacific subtropical gyre[J]. Frontiers in microbiology,2017,8:1122.
[30] JABIR T, VIPINDAS P V, KRISHNAN K P, et al.Abundance and diversity of diazotrophs in the surface sediments of Kongsfjorden, an Arctic fjord[J]. World journal of microbiology and biotechnology,2021,37(3):1-15.
[31] 褚海燕. 高寒生态系统微生物群落研究进展[J]. 微生物学通报,2013,40(1):123-136.
[32] 任佐华, 张于光, 李迪强, 等. 三江源地区高寒草原土壤微生物活性和微生物量[J]. 生态学报,2011,31(11):3232-3238.
[33] 陈伟. 天山1号冰川退缩地土壤微生物多样性研究[D]. 兰州:兰州交通大学,2012.
[34] YANG Y, GAO Y, WANG S, et al.The microbial gene diversity along an elevation gradient of the Tibetan grassland[J]. The ISME Journal,2014,8(2):430-440.
[35] 李萌. 青藏高原高寒草甸厌氧氨氧化菌群群落结构及丰度的研究[D].兰州:兰州大学,2015.
[36] LIU Q, ZHOU Y G, XIN Y H.High diversity and distinctive community structure of bacteria on glaciers in China revealed by 454 pyrosequencing[J]. Systematic and applied microbiology,2015, 38(8):578-585.
[37] WANG X J, ZHANG Z C, YU Z Q, et al.Composition and diversity of soil microbial communities in the alpine wetland and alpine forest ecosystems on the Tibetan Plateau[J]. Science of the total environment, doi: 10.1016/j.scitotenv.2020.141358.
[38] 张于光,王慧敏,李迪强,等. 三江源地区不同植被土壤固氮微生物的群落结构研究[J]. 微生物学报,2005,45(3):420-425.
[39] 尚占环,丁玲玲,龙瑞军,等. 江河源区高寒草地土壤微生物数量特征[J]. 草原与草坪,2006(5): 3-7.
[40] 康文龙,台喜生,李师翁,等.祁连山高寒草原碱性土壤固氮微生物数量及固氮基因(nifH)群落结构研究[J].冰川冻土,2013,35(1):208-216.
[41] LIU J, KONG W, ZHANG G, et al.Diversity and succession of autotrophic microbial community in high-elevation soils along deglaciation chronosequence[J]. FEMS microbiology ecology,2016,92(10):152-160.
[42] ZENG J, LOU K, ZHANG C J, et al.Primary succession of nitrogen cycling microbial communities along the deglaciated forelands of Tianshan Mountain,China[J]. Frontiers in microbiology,2016,7:1353.
[43] KUMAR M, VAN ELSAS J D, NISSINEN R. Strong regionality and dominance of anaerobic bacterial taxa characterize diazotrophic bacterial communities of the arcto-alpine plant species Oxyria digyna and Saxifraga oppositifolia[J]. Frontiers in microbiology,2017,8:1972.
[44] WANG Y,CHEN Y,XUE Q,et al.The abundance of the nifH gene became higher and the nifH-containing diazotrophic bacterial communities changed during primary succession in the Hailuogou Glacier Chronosequence,China[J]. Frontiers in microbiology,2021,doi:10.3389/fmicb.2021.672656.
[45] WANG S,HOU W,DONG H,et al.Control of temperature on microbial community structure in hot springs of the Tibetan Plateau[J]. PLoS One,2013,8(5):e62901.
[46] 冯灿,杨渐,蒋宏忱. 云南腾冲两条热泉溪流的固氮细菌群落多样性[J]. 地球科学,2018,43(S1):10-18.