湖北农业科学 ›› 2022, Vol. 61 ›› Issue (6): 153-156.doi: 10.14088/j.cnki.issn0439-8114.2022.06.030

• 生物工程 • 上一篇    下一篇

黑木耳多巴色素异构酶基因的克隆与生物信息学分析

王国红, 李丹林, 朱柏润, 马怀良, 穆燕, 律凤霞, 姜明   

  1. 牡丹江师范学院生命科学与技术学院,黑龙江 牡丹江 157012
  • 收稿日期:2021-06-07 出版日期:2022-03-25 发布日期:2022-04-18
  • 通讯作者: 马怀良(1976-),男,黑龙江牡丹江人,副教授,主要从事应用微生物研究工作,(电话)15846786279(电子信箱)swxmhl@126.com。
  • 作者简介:王国红(1993-),男,贵州毕节人,硕士,主要从事应用微生物研究工作,(电话)15172537146(电子信箱)2921275412@qq.com。

Cloning and bioinformatics analysis of dopachrome tautomerase gene from Auricularia auricula

WANG Guo-hong, LI Dan-lin, ZHU Bo-run, MA Huai-liang, MU Yan, LYU Feng-xia, JIANG Ming   

  1. College of Life Science and Technology, Mudanjiang Normal University, Mudanjiang 157012, Heilongjiang,China
  • Received:2021-06-07 Online:2022-03-25 Published:2022-04-18

摘要: 以黑木耳菌株Mn150 DNA为模板,设计特异性引物,对多巴色素异构酶基因进行克隆,该基因生物信息学分析结果表明,多巴色素异构酶基因序列长度为355 bp,编码112个氨基酸,分子质量为13.05 kDa,分子式为C584H921N181O153S4,等电点为10.35,为亲水性蛋白。该蛋白含有1个4-Oxalocrotonate Tautomerase Superfamily保守结构域,没有信号肽,不含跨膜结构,由20.54%的α-螺旋、5.36%的β-折叠、54.46%的无规卷曲和19.64%延伸链组成。该结果可为进一步研究黑木耳多巴色素异构酶基因功能奠定基础。

关键词: 黑木耳, 多巴色素异构酶, 生物信息学分析

Abstract: Using the strain Mn150 of Auricularia auricula as test material,specific primer were designed to clone the dopachrome tautomerase gene. Bioinformatics analysis of the gene showed that the dopachrome tautomerase gene sequence length was 355 bp, encoding 112 amino acids, the molecular weight was 13.05 kDa, and the molecular formula was C584H921N181O153S4, the isoelectric point was 10.35, which was a hydrophilic protein. The amino acid sequence of this protein contained a 4-Oxalocrotonate Tautomerase Superfamily conservative domain,no signal peptide, no transmembrane structure,made up of 20.54% α helix, 5.36% β ture, 54.46% random coil and 19.64% extended strand. These results can provide a foundation for further study on the function of dopachrome tautomerase gene in Auricularia auriculata.

Key words: Auricularia auricula, dopachrome tautomerase, bioinformatics analysis

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